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Phylogenetic and ion-response analyses reveal a relationship between gene expansion and functional divergence in the Ca2+/cation antiporter family in Angiosperms
Ca2+/cation antiporters superfamily (CaCAs) Phylogenetic analyses Selective expansion Expression divergence Ion-response pattern Functional divergence
2023/12/18
Plants and animals face different environmental stresses but share conserved Ca2+ signaling pathways, such as Ca2+/Cation transport. The Ca2+/cation antiporters superfamily (CaCAs) is an ancient and w...
Genome-wide analyses of PAM-relaxed Cas9 genome editors reveal substantial off-target effects by ABE8e in rice
AM-relaxed Cas9 nucleases cytosine base editor adenine base editor off-target effect whole-genome sequencing genome editing rice
2023/7/20
PAM-relaxed Cas9 nucleases, cytosine base editors and adenine base editors are promising tools for precise genome editing in plants. However, their genome-wide off-target effects are largely unexplore...
Nitrogen-Regulated Theanine and Flavonoid Biosynthesis in Tea Plant Roots: Protein-Level Regulation Revealed by Multiomics Analyses
茶氨酸 黄酮类化合物 原花青素 茶树
2023/4/19
Theanine and flavonoids (especially proanthocyanidins) are the most important and abundant secondary metabolites synthesized in the roots of tea plants. Nitrogen promotes theanine and represses flavon...
Transcriptome and QTL analyses reveal candidate genes for fiber quality in Upland cotton
棉花 纤维发育 QTL 转录组 表达基因
2024/5/17
本研究基于前期得到的1个F2群体、1个重组自交系群体和2个永久回交群体得到了15个在多群体或者多年分稳定检测的QTL位点。基于转录组测序，在两亲本间发育10天的纤维进行差异基因鉴定，得到了780个差异基因。通过对QTL和转录组结果联合分析，在9个QTL区间内得到31个基因，其中有9个在纤维中优异表达的基因。在这9个基因中，有7个基因在纤维伸长期高量表达，2个基因在纤维次生壁加厚期高量表达。该研究为...
Inheritance and quantitative trait loci analyses of the anthocyanins and catechins of Camellia sinensis cultivar ‘Ziyan’ with dark-purple leaves
Inheritance quantitative trait loci analyse anthocyanins catechins Camellia sinensis Ziyan dark-purple leaves
2024/7/30
Owing to the potential health benefifits, anthocyanin-rich teas (Camellia sinensis) have attracted interest over the past decade. Previously, we devel oped the cultivar ‘Ziyan,’ which has dark-purple ...
Physiological and genome-wide gene expression analyses of cold-induced leaf rolling at the seedling stage in rice (Oryza sativa L.)☆
Rice (Oryza sativa L.) Cold-induced leaf yellowing Cold-induced leaf rolling Physiological analysis
2023/4/21
Leaf rolling and discoloration are two chilling-injury symptoms that are widely used as indicators for the evaluation of cold tolerance at the seedling stage in rice. However, the difference in cold-r...
Transcriptome -wide modulation combined with morpho-physiological analyses of Typha orientalis roots in response to lead challenge
Pb stress RNA sequencing RT-qPCR ToLR1 Transcriptomics Typha orientalis
2023/8/9
Lead (Pb) is a common pollutant in many environments, including in the soil, water, and/or air. Typha orientalis Presl, a large emergent aquatic plant, has been reported to function as a Pb-tolerant a...
Pedigree analyses of the Zatorska goose population
waterfowl genetic diversity local breed inbreeding level
2015/12/17
The structure of the Zatorska breed was estimated in the context of the realized conservation program. The level of genetic diversity and effective population size were estimated as well. The followin...
Analyses of anaesthesia with ketamine combined with different sedatives in rats
anaesthesia rats ketamine sedatives
2015/8/14
The goal of this study was to establish an easy-to-perform, reliable, and safe protocol for intraperitoneal injection anaesthesia in rats, as well as an easy method to assess anaesthesia depth under r...
Analyses of genetic relationships between linear type traits, fat-to-protein ratio, milk production traits, and somatic cell count in first-parity Czech Holstein cows
Holstein cattle genetic parameters milk yield somatic cell score
2015/7/2
Genetic and phenotypic correlations between production traits, selected linear type traits, and somatic cell score were estimated. The results could be useful for breeding programs involving Czech Hol...
Lamb Production Costs: Analyses of Composition and Elasticities Analysis of Lamb Production Costs
Elasticity Lamb Production Cost Production System Technical Indicator
2016/5/18
Since lamb is a commodity, producers cannot control the price of the product they sell. Therefore, managing production costs is a necessity. We explored the study of elasticities as a tool for basing ...
Diversity of Oat Crown Rust (Puccinia coronata f.sp. avenae) Isolates Detected by Virulence and AFLP Analyses
Puccinia coronata f.sp. avenae oat crown rust
2015/3/5
Forty Puccinia coronata f.sp. avenae isolates from several European countries and Israel were tested for virulence
to 18 differential oat lines. Amplified Fragment Length Polymorphism (AFLP) analysi...
Genome-wide Single Nucleotide Polymorphism Analyses Reveal Genetic Diversity and Structure of Wild and Domestic Cattle in Bangladesh
Genome-wide Single Nucleotide Polymorphism Analyses Gayal Domestic Cattle
2016/5/17
In spite of variation in coat color, size, and production traits among indigenous Bangladeshi cattle populations, genetic differences among most of the populations have not been investigated or exploi...
Resilience, reliability and risk analyses of maize, sorghum and sunflower in rain-fed systems using a soil moisture modeling approach
Resilience Reliability Risk Analysis: Agricultural Drought Index
2013/2/27
This paper is aimed at examining the applicability of methods for resilience, reliability and risk analyses of rain-fed agricultural systems from modeled continuous soil moisture availability in rain-...
Preparation and mechanism analyses of a new corn seed coating agent
Coating Germination Rate Inhibitory Rate Antifeedant Rate
2013/3/5
Due to the severity of the disease and yield losses of corn, this study had achieved a novel corn seed coating agent which was prepared with polysaccharide, fertilizer, microelement and other assistan...